Scleroderma capeverdeanum, a subhypogeous fungus new to Japan, collected from the Eucalyptus plantation in Ibaraki Prefecture

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Kasuya T, Uzawa M, Hosaka K (2022) Truffology 5(1): 23–32
Submitted: 14 December 2021
Accepted: 19 March 2022
Published: 31 March 2022

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Abstract

A subhypogeous sclerodermataceous fungus was collected in the Eucalyptus plantation of Ibaraki Prefecture,
central Japan. Based on morphological observations and phylogenetic analyses using nuclear ribosomal DNA
sequences, the present fungus was identified as Scleroderma capeverdeanum, belonging to Sclerodermataceae
(Boletales). Scleroderma capeverdeanum is new to Japan and characterized by small-sized (4–10 mm in diam.),
sessile basidiomata, yellowish to yellowish brown exoperidium with brownish, areolate to verrucose scales, and
echinulate basidiospores. Japanese specimens of S. capeverdearnum are probably associated with introduced E.
globulus
, and therefore they are most likely exotic species introduced from Australia.

References

  1. Baseia I.G, Silva B.D.B., Ishikawa N.K., Soares J.V.C., França I.F.,
    Ushijima S., Maekawa N., Martín M.P. (2016) Discovery or extinction
    of new Scleroderma species in Amazonia? PLoS ONE 11: e0167879.

  2. Bashir H., Khalid A.N. (2015) Morpho-anatomical and molecular
    characterisation of ectomycorrhizae associated with Eucalyptus species
    growing in different areas of the Punjab Province, Pakistan. Australian
    Journal of Botany 62: 689–697.

  3. Beaton G., Weste G. (1982) A new species of Scleroderma from Victoria,
    Australia. Transactions of the British Mycological Society 79: 41–43.

  4. Binder M., Bresinsky A. (2002) Derivation of a polymorphic lineage of
    Gasteromycetes from boletoid ancestors. Mycologia 94: 85–98.

  5. Binder M., Hibbett D.S. (2006) Molecular systematics and biological
    diversification of Boletales. Mycologia 98: 971–981.

  6. Coccia M., Migliozzi V., Lavorato C. (1990) Studio sul genere
    Scleroderma Persoon. Bollettino dell’Associazione Micologia ed
    Ecologica Romana 20–21: 3–59.

  7. Crous P.W., Wingfield M.J., Richardson D.M., Le Roux J.J., Strasberg
    D., Edwards J., Roets F., Hubka V., Taylor P.W.J., Heykoop M.,
    Martín M.P., Moreno G., Sutton D.A., Wiederhold N.P., Barnes
    C.W., Carlavilla J.R., Gené J., Giraldo A., Guarnaccia V., Guarro
    J., Hernández-Restrepo M., Kolařík M., Manjón J.L., Pascoe I.G.,
    Popov E.S., Sandoval-Denis M., Woudenberg J.H.C., Acharya K.,
    Alexandrova A.V., Alvarado P., Barbosa R.N., Baseia I.G., Blanchette
    R.A., Boekhout T., Burgess T.I., Cano-Lira J.F., Čmoková A., Dimitrov
    R.A., Dyakov M.Y., Dueñas M., Dutta A.K., Esteve-Raventós F.,
    Fedosova A.G., Fournier J., Gamboa P., Gouliamova D.E., Grebenc
    T., Groenewald M., Hanse B., Hardy G.E.St.J., Held B.W., Jurjević
    Ž., Kaewgrajang T., Latha K.P.D., Lombard L., Luangsa-Ard J.J.,
    Lysková P., Mallátová N., Manimohan P., Miller A.N., Mirabolfathy M.,
    Morozova O.V., Obodai M., Oliveira N.T., Ordóñez M.E., Otto E.C.,
    Paloi S., Peterson S.W., Phosri C., Roux J., Salazar W.A., Sánchez
    A., Sarria G.A., Shin H.-D., Silva B.D.B., Silva G.A., Smith M.Th.,
    Souza-Motta C.M., Stchigel A.M., Stoilova-Disheva M.M., Sulzbacher
    M.A., Telleria M.T., Toapanta C., Traba J.M., Valenzuela-Lopez N.,
    Watling R., Groenewald J.Z. (2016) Fungal Planet description sheets:
    400-468. Persoonia 36: 316–458.

  8. Disyatat N.R., Yomyart S., Sihanonth P., Piapukiew J. (2016) Community
    structure and dynamics of ectomycorrhizal fungi in a dipterocarp forest
    fragment and plantation in Thailand. Plant Ecology & Diversity 9:
    577–588.

  9. Edgar R.C. (2004a) MUSCLE: multiple sequence alignment with high
    accuracy and high throughput. Nucleic Acids Research 32: 1792–1797.

  10. Edgar R.C. (2004b) MUSCLE: a multiple sequence alignment method
    with reduced time and space complexity. BMC Bioinformatics 5: 113.

  11. Felsenstein J. (1985) Confidence limits on phylogenies: an approach
    using the bootstrap. Evolution 39: 783–791.

  12. Frahm J.P., Lindlar A., Sollman P., Fischer E. (1996) Bryophytes from the
    Cape Verde Islands. Tropical Bryology 12: 123–153.

  13. Giachini A.J., Oliveira V.L., Castellano M.A., Trappe J.M. (2000)
    Ectomycorrhizal fungi in Eucalyptus and Pinus plantations in southern
    Brazil. Mycologia 92: 1166–1177.

  14. Gube M., Dörfelt H. (2012) Gasteromycetation in Agaricaceae s. l.
    (Basidiomycota): morphological and ecological implementations.
    Feddes Repertorium 122: 367–390.

  15. Guzmán G. (1970) Monografia del género Scleroderma Pers. emend. Fr.
    (Fungi-Basidiomycetes). Darwiniana 16: 233–407.

  16. Guzmán G., Ovrebo C.L. (2000) New observations on
    sclerodermataceous fungi. Mycologia 92: 174–179.

  17. Guzmán G., Cortés-Pérez A., Guzmán-Dávalos L., Ramírez-Guillén F.,
    Sánchez-Jácome, M.R. (2013) An emendation of Scleroderma, new
    records, and review of the known species in Mexico. Revista Mexicana
    de Biodiversidad 84: 173–191.

  18. Hall T.A. (1999) BioEdit: a user-friendly biological sequence alignment
    editor and analysis program for Windows 95/98/NT. Nucleic Acids
    Symposium Series 41: 95–98.

  19. Hosaka K. (2009) Phylogeography of the genus Pisolithus revisited with
    some additional taxa from New Caledonia and Japan. Bulletin of the
    National Museum of Nature and Science, Series B 35: 151–167.

  20. Hosaka K., Castellano M.A. (2008) Molecular phylogenetics of
    Geastrales with special emphasis on the position of Sclerogaster.
    Bulletin of the National Museum of Nature and Science, Series B 34:
    161–173.

  21. Hosaka K., Kasuya T., Reynolds H.T., Sung G.H. (2010) A new record of
    Elaphomyces guangdongensis (Elaphomycetaceae, Eurotiales, Fungi)
    from Taiwan. Bulletin of the National Museum of Nature and Science,
    Series B 36: 107–115.

  22. Huang C., Zhang M., Wu X.-L., Wu G., Xu J.-P., Yang Z.L., Li Y.-C.
    (2021) Cyanescent Gyroporus (Gyroporaceae, Boletales) from China.
    MycoKeys 81: 165–183.

  23. Inuma T., Kansako M., Nakashima C. (2015) Leaf and shoot blight of
    Eucalypts caused by Pseudoplagiostoma eucalypti (in Japanese with
    English summary). Tree and Forest Health 19: 133–138.

  24. Kanchanaprayudh J., Zhou Z., Yomyart S., Sihanonth P., Hogetsu T. (2003)
    Molecular phylogeny of ectomycorrhizal Pisolithus fungi associated
    with pine, dipterocarp, and eucalyptus trees in Thailand. Mycoscience
    44: 287–294.

  25. Kasuya T., Guzmán G. (2007) Veligaster nitidum, a pantropical
    sclerodermataceous fungus new to Japan and Thailand. Mycoscience
    48: 259–262.

  26. Kasuya T., Guzmán G., Ramírez-Guillén F., Kato T. (2002) Scleroderma
    laeve
    (Gasteromycetes, Sclerodermatales), new to Japan. Mycoscience
    43: 475–476.

  27. Kasuya T., Hosaka K., Uno K., Kakishima M. (2012) Phylogenetic
    placement of Geastrum melanocephalum and polyphyly of Geastrum
    triplex
    . Mycoscience 53: 411–426.

  28. Kimura M. (1980) A simple method for estimating evolutionary rate of
    base substitutions through comparative studies of nucleotide sequences.
    Journal of Molecular Evolution 16: 111–120.

  29. Komaki H., Okamura A., Sayeki M., Niwa Y., Sonoda Y. (2000) The
    chemical composition of Eucalyptus leaves and palatability of Koala
    (Phascolarctos cinereus) (in Japanese with English summary).
    Japanese Journal of Zoo and Wildlife Medicine 5: 127–132.

  30. Kumar S., Stecher G., Li M., Knyaz C., Tamura K. (2018) MEGA X:
    Molecular Evolutionary Genetics Analysis across computing platforms.
    Molecular Biology and Evolution 35: 1547–1549.

  31. Louzan R., Wilson A.W., Binder M., Hibbett D.S. (2007) Phylogenetic
    placement of Diplocystis wrightii in the Sclerodermatineae
    (Boletales) based on nuclear ribosomal large subunit DNA sequences.
    Mycoscience 48: 66–69.

  32. Mrak T., Kühdorf K., Grebenc T., Štraus I., Münzenberger B., Kraigher H.
    (2017) Scleroderma areolatum ectomycorrhiza on Fagus sylvatica L.
    Mycorrhiza 27: 283–293.

  33. Nara K. (2006) Ectomycorrhizal networks and seedling establishment
    during early primary succession. New Phytologist 169: 169–178.

  34. Nouhra E.R., Caffot M.L.H., Pastor N., Crespo E.M. (2012) The species
    of Scleroderma from Argentina, including a new species from the
    Nothofagus forest. Mycologia 104: 488–495.

  35. Ortiz-Rivero J., Watling R., Guzmán-Dávalos L., Martín M.P. (2021)
    The many-rooted earthball—Scleroderma geaster and S. polyrhizum
    revisited, with the description of a new species. Phytotaxa 510: 1–17.

  36. Phosri C., Martín M.P., Sihanonth P., Whalley A.J.S., Watling R. (2007)
    Molecular study of the genus Astraeus. Mycological Research 111:
    275–286.

  37. Phosri C., Martín M.P., Watling R., Jeppson M., Sihanonth P. (2009)
    Molecular phylogeny and re-assessment of some Scleroderma spp.
    (Gasteromycetes). Anales del Jardín Botánico de Madrid 66(S1):
    83–91.

  38. Phosri C., Martín M.P., Suwannasai N., Sihanonth P., Watling R. (2012)
    Pisolithus: a new species from southeast Asia and a new combination.
    Mycotaxon 120: 195–208.

  39. Rose R.W.Jr., Dyke C.G.V., Davey C.B. (1981) Scanning electron
    microscopy of three types of ectomycorrhizae formed on Eucalyptus
    nova-anglica
    in the southeastern United States. Canadian Journal of
    Botany 59: 683–688.

  40. Sanon K.B., Bâ A.M., Delaruelle C., Duponnois R., Martin F. (2009)
    Morphological and molecular analyses in Scleroderma species associated
    with some Caesalpinioid legumes, Dipterocarpaceae and Phyllanthaceae
    trees in southern Burkina Faso. Mycorrhiza 19: 571–584.

  41. Sene S., Avril R., Chaintreuil C., Geoffroy A., Ndiaye C., Diedhiou
    A.G., Sadio O., Courtecuisse R., Sylla S.N., Selosse M.A. , Bâ A.M.
    (2015) Ectomycorrhizal fungal communities of Coccoloba uvifera
    (L.) L. mature trees and seedlings in the neotropical coastal forests of
    Guadeloupe (Lesser Antilles). Mycorrhiza 25: 547–559.

  42. Seutin G., White B.N., Boag P.T. (1991) Preservation of avian blood and
    tissue samples for DNA analyses. Canadian Journal of Zoology 69:
    82–90.

  43. Shibata N., Yoshikawa K. (1956) Some experimental considerations
    of silviculture of Eucalyptus (1). On the effect of the soil types and
    manure upon the growth of Eucalyptus rostrata seedlings (in Japanese
    with English summary). Bulletin of the Kyoto University Forests 26:
    1–9.

  44. Siri-in J., Kumla J., Suwannarach N., Lumyong S. (2014) Culture
    conditions and some properties of pure culture of ectomycorrhizal
    fungus, Scleroderma sinnamariense. Chiang Mai Journal of Science
    41: 275–285.

  45. Sims K.P., Watling R., Jeffries P. (1995) A revised key to the genus
    Scleroderma. Mycotaxon 56: 403–420.

  46. Swofford, D.L. (2002) PAUP*. Phylogenetic analysis using parsimony
    (*and other methods). MA Sinauer Associates, Sunderland.

  47. Tamura K., Nei M. (1993) Estimation of the number of nucleotide
    substitutions in the control region of mitochondrial DNA in humans
    and chimpanzees. Molecular Biology and Evolution 10: 512–526.

  48. Tedersoo L., Bahram M., Jairus T., Bechem E., Chinoya S., Mpumba R.,
    Leal M., Randrianjohany E., Razafimandimbison S., Sadam A., Naadel
    T., Kõljalg, U. (2011) Spatial structure and the effects of host and soil
    environments on communities of ectomycorrhizal fungi in wooded
    savannas and rain forests of Continental Africa and Madagascar.
    Molecular Ecology 20: 3071–3080.

  49. Vilgalys R., Hester M. (1990) Rapid genetic identification and mapping
    of enzymatically amplified DNA from several Cryptococcus species.
    Journal of Bacteriology 172: 4238–4246.

  50. Walbert K., Ramsfield T.D., Ridgway H.J., Jones E.E. (2010)
    Ectomycorrhizal species associated with Pinus radiata in New Zealand
    including novel associations determined by molecular analysis.
    Mycorrhiza 20: 209–215.

  51. Watling R. (2006) The sclerodermatoid fungi. Mycoscience 47: 18–24.
  52. White T.J., Bruns T., Lee S., Taylor J.W. (1990) Amplification and direct
    sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis
    M.A., Gelfand D.H., Sninsky J.J., White T.J. (eds.) PCR protocols.
    Academic Press, New York, pp. 315–322.

  53. Wilson A.W., Binder M., Hibbett D.S. (2011) Effects of gasteroid fruiting
    body morphology on diversification rates in three independent clades
    of fungi estimated using binary state speciation and extinction analysis.
    Evolution 65: 1305–1322.

  54. Yoshimi S. (2002) Taxonomic study of the Japanese taxa of Scleroderma
    Pers. (in Japanese with English summary). Nippon Kingakukai Kaiho
    43: 3–18.

  55. Zhang C., Xu X.-E., Liu J., He M., Wang W., Wang Y., Ji K. (2013)
    Scleroderma yunnanense, a new species from South China. Mycotaxon
    125: 193–200.

  56. Zhang Y.-Z., Sun C.-Y., Sun J., Zhang K.-P., Zhang H.-S., Guo X., Zhou
    Y.-J., Zheng D.-S., Li H.-J. (2020) Scleroderma venenatum sp. nov.,
    S. venenatum var. macrosporum var. nov. and S. suthepense new to
    China. Phytotaxa 438: 107–118.